MOMD:
Mouse Oral Microbiome Database
Home
Taxonomy
Genomics
Tools
16S rRNA Gene Idnetification
BLAST Search Genomes
Download
Publication
MOMD Genome Explorer
Selected genome:
Streptococcus sp.
19428wC2_LYSM12
Change genome:
Available genomes
1. Actinomyces bowdenii WMus004.1
2. Bacteroides acidifaciens 19428wH3_P2318
3. Bacteroides acidifaciens 8_33DSS_C5_S8
4. Citrobacter koseri 19428wH4_BL23
5. Dysgonomonas mossii 19428wE4_P11
6. Enterococcus gallinarum 19428wB3_C2
7. Enterococcus gallinarum ENT.1
8. Escherichia coli 19428wD4_HM13
9. Gemella palaticanis CIP106318T.1
10. Gemella sp. 19428wG2_WT2a
11. Gemella sp. GH3.1
12. Gemella sp. GL1.1
13. Granulicatella sp. 19428wC4_WM01
14. Jeotgalicoccus nanhaiensis 19428wE5_W307
15. Lactobacillus johnsonii 19428wE2_CC3
16. Lactobacillus murinus LAC.1
17. Ligilactobacillus murinus 19428wF2_HT12
18. Ligilactobacillus murinus 2_2BalbC1BO2_S2
19. Mammaliicoccus lentus 19428wC1_HT5
20. Mammaliicoccus lentus 19428wG1_AE2
21. Mammaliicoccus lentus 3_3BalbC2O2_S3
22. Mammaliicoccus sciuri 19428wE1_BL01
23. Mammaliicoccus sciuri ACT.1
24. Microbacterium paludicola 19428wA4_P1012
25. Micrococcus aloeverae 19428wE3_DK2
26. Micrococcus yunnanensis 19428wG4_IOV6
27. Muribacter muris 19428wC3_WT12
28. Muribacter muris 7_18CXCR221ANO_S7
29. Neisseria sp. 19428wB4_WF04
30. Parabacteroides goldsteinii 19428wG3_P14
31. Pasteurella sp. 19428wF3_WM03
32. Proteus mirabilis 19428wB5_irhom_Sw
33. Providencia alcalifaciens WMus003.1
34. Rothia nasimurium 19428wA5_irhom_31
35. Sanguibacter inulinus DSM100099.1
36. Shigella flexneri 19428wH2_1568
37. Staphylococcus arlettae 19428wH1_IOV5
38. Staphylococcus aureus 19428wD1_P36
39. Staphylococcus aureus 4_5BalbC4O2_S4
40. Staphylococcus aureus STF.1
41. Staphylococcus capitis GW2.1
42. Staphylococcus saprophyticus 19428wB1_WM06
43. Staphylococcus warneri 19428wF1_P912
44. Staphylococcus xylosus 19428wA1_WT6
45. Streptococcus acidominimus 19428wB2_HT4
46. Streptococcus acidominimus 6_8CXCR23O2_S6
47. Streptococcus cuniculi 19428wD2_WM131
48. Streptococcus danieliae 1_1BalbC1O2_S1
49. Streptococcus danieliae STR.1
50. Streptococcus sp. 19428wA2_WM07
51. Streptococcus sp. 19428wC2_LYSM12
52. Streptococcus sp. 19428wD3_AN2
from a total of 52 genomes
Available tools:
Genome Viewer
PROKKA Annotation
NCBI Annotation
BLAST Against Genome
Genome Info
Taxon Description
Quick search
:
Match all words
Match any words
Match exact phrase
Partially
In whole field
(leave empty to show all)
PROKKA Genome Annotation:
contigs: 98
bases: 2,425,255 bps
CDS: 2,054
rRNA: 5
Repeat region:
tmRNA: 1
tRNA: 45
misc RNA:
Total features: 2,105
Total number of protein coding genes annotated/found:
2,054
Display
20
50
100
All items per page
Items 1 - 20
🡆
click arrow to navigate by page or
of 103 pages
Molecule
PID/GenBank ID *^
Sequences
Size (NA/AA) ^
Range ^
Gene Product Name
SEQF5036|JADGLD010000022.1
SEQF5036_00854
Genome Viewer
NA
AA
210/70
96-305
Putative transposase InsK for insertion sequence element IS150
SEQF5036|JADGLD010000022.1
SEQF5036_00855
Genome Viewer
NA
AA
1155/385
2289-1135
hypothetical protein
SEQF5036|JADGLD010000022.1
SEQF5036_00856
Genome Viewer
NA
AA
282/94
2917-2636
hypothetical protein
SEQF5036|JADGLD010000022.1
SEQF5036_00857
Genome Viewer
NA
AA
639/213
3549-2911
hypothetical protein
SEQF5036|JADGLD010000022.1
SEQF5036_00858
Genome Viewer
NA
AA
204/68
4082-3879
hypothetical protein
SEQF5036|JADGLD010000022.1
SEQF5036_00859
Genome Viewer
NA
AA
1431/477
6069-4639
Putative HMP/thiamine import ATP-binding protein YkoD
SEQF5036|JADGLD010000022.1
SEQF5036_00860
Genome Viewer
NA
AA
660/220
6692-6033
hypothetical protein
SEQF5036|JADGLD010000022.1
SEQF5036_00861
Genome Viewer
NA
AA
594/198
7282-6689
hypothetical protein
SEQF5036|JADGLD010000022.1
SEQF5036_00862
Genome Viewer
NA
AA
1680/560
9518-7839
putative ABC transporter ATP-binding/permease protein
SEQF5036|JADGLD010000022.1
SEQF5036_00863
Genome Viewer
NA
AA
1758/586
11268-9511
Putative multidrug export ATP-binding/permease protein
SEQF5036|JADGLD010000022.1
SEQF5036_00864
Genome Viewer
NA
AA
5070/1690
16939-11870
hypothetical protein
SEQF5036|JADGLD010000022.1
SEQF5036_00865
Genome Viewer
NA
AA
1095/365
18812-17718
tRNA(Met) cytidine acetate ligase
SEQF5036|JADGLD010000022.1
SEQF5036_00866
Genome Viewer
NA
AA
735/245
19543-18809
2-methoxy-6-polyprenyl-1%2C4-benzoquinol methylase%2C mitochondrial
SEQF5036|JADGLD010000022.1
SEQF5036_00867
Genome Viewer
NA
AA
351/117
20145-19795
Ribosomal silencing factor RsfS
SEQF5036|JADGLD010000022.1
SEQF5036_00868
Genome Viewer
NA
AA
588/196
20974-20387
hypothetical protein
SEQF5036|JADGLD010000022.1
SEQF5036_00869
Genome Viewer
NA
AA
633/211
21603-20971
Nicotinate-nucleotide adenylyltransferase
SEQF5036|JADGLD010000022.1
SEQF5036_00870
Genome Viewer
NA
AA
312/104
21960-21649
RNA-binding protein YhbY
SEQF5036|JADGLD010000022.1
SEQF5036_00871
Genome Viewer
NA
AA
1107/369
23091-21985
putative protein YqeH
SEQF5036|JADGLD010000022.1
SEQF5036_00872
Genome Viewer
NA
AA
528/176
23619-23092
Pyrophosphatase PpaX
SEQF5036|JADGLD010000022.1
SEQF5036_00873
Genome Viewer
NA
AA
627/209
24762-24136
Copper homeostasis protein CutC
Items 1 - 20
🡆
click arrow to navigate by page or
of 103 pages
Genome Viewer
JBrowse Genome Viewer
* Click GI, UID, Gene Product to go to NCBI record
^ Click column names to toggle sorting
Copyright 2020 Forsyth Institute
Page last updated: July 7, 2021 08:39:35
Powered by